Abstracts presentations

Date Title Author
Nov 04, 10:15 The secrets of life without sex: an oribatid mite perspective Jens Bast
Nov 04, 10:45 The dynamic evolution of the heme biosynthesis in Planctomycetota bacteria Alejandro Jiménez-González
Nov 04, 11:00 Exceptional genetic variation at MHC class II genes in Atlantic herring unveiled through long-read sequencing Fahime Mohamadnejad Sangdehi
Nov 04, 11:15 Sperm DNA methylation landscape and its links to semen quality in a non-model teleost Fotis Pappas
Nov 04, 13:30 Climate adaptation from longitudinal growth observations in natural forest trees Kelly Swarts
Nov 04, 14:00 Molecular and pharmacological profiling of pediatric B-cell precursor acute lymphoblastic leukemia Olga Krali
Nov 04, 14:15 Genetic and Transcriptomic Insights into Early-Onset Advanced Heart Failure: Findings from the SwedeHeartSeq Project Philipp Rentzsch
Nov 04, 14:30 Genome-wide comparison reveals large structural variants in the cassava landraces Michael Landi
Nov 04, 16:00 Ensemble net and Protein Embeddings generalise Protein Interface Prediction beyond Homology Anton Feenstra
Nov 04, 16:30 Nanoparticle diffusion through native and artificial porcine colonic mucus model studied by diffusional fingerprinting – A machine learning framework Shakhawath Hossain
Nov 04, 16:45 Machine learning detection of antibiotic heteroresistance in E. coli Andrei Guliaev
Nov 04, 17:00 Statistical guarantees for multiclass leukemia machine learning classifiers using conformal risk control Mariya Lysenkova Wiklander
Nov 05, 11:30 Data-driven methods for microbial secondary metabolite discovery Laura Caroll
Nov 05, 12:00 Wastewater-based genomic surveillance of ESBL-producing Escherichia Coli Vaishnavi Divya Shridar
Nov 05, 12:15 Extreme meta’omics: handling 15Tb+ of data from the Central Arctic Ocean Moritz Buck
Nov 05, 12:30 Analysis of pig farm environment’s resistome: methodological aspects Valeriia Ladyhina
Nov 05, 14:00 Reconstructing 3D layouts from cell graphs Ludvig Larsson (Pixelgen)
Nov 05, 14:30 Cactus: A user-friendly and reproducible ATAC-Seq and mRNA-Seq analysis pipeline for data preprocessing, differential analysis, and enrichment analysis Jérôme Salignon
Nov 05, 14:45 FunCoup v6: advancing functional networks across species with directed links and improved user experience Davide Buzzao
Nov 05, 15:30 From Bench to Big Data: What’s new with MultiQC and Nextflow Phil Ewels
Nov 05, 16:00 methylR 2.0: an enhanced user-friendly solution for DNA methylation array analysis Jyotirmoy Das
Nov 05, 16:15 ‘rCNV’, a comprehensive framework to detect gene copy number variations from SNPs data Pascal Milesi
Nov 05, 16:30 Computational inference reveals cancer lineages and identifies early markers of tumor invasion Marcel Tarbier
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Abstracts posters

Date Title Author
Nov 04, 14:45 Imputation helps with predicting postpartum depression from compositional microbiome data Andrey Shternshis
Nov 04, 14:45 SciLifeLab Data Centre services supporting data management and sharing in Sweden Angela Fuentes Pardo
Nov 04, 14:45 Genome-scale metabolic modeling identifies sites at risk for metabolism-induced promotion of cancer-associated muscle atrophy Brennan Wadsworth
Nov 04, 14:45 Quantifying Spatial Coherence in DNA Barcode Networks David Fernandez Bonet
Nov 04, 14:45 Modeling cell state transitions through generative reinforcement learning and gene regulatory networks Deniz Seçilmiş
Nov 04, 14:45 Metatranscriptomic study of a high-solid anaerobic digester operated at high ammonia levels Ebba Perman
Nov 04, 14:45 Bacterial vaginosis: Understanding the effect of antibiotic-free treatment (pHyph) on the vaginal microbiome Emilia Lahtinen
Nov 04, 14:45 When the pathogen becomes the prey: responses of different plant pathogens facing mycoparasitic organisms Florian Rocher
Nov 04, 14:45 The evolution of gene CNVs in C. rubella Freja Lindstedt
Nov 04, 14:45 A new pedagogical approach for master-level Bioinformatics courses Gabriele Pozzati
Nov 04, 14:45 Unraveling Estrogen Receptor Beta Signaling In Alzheimer’s Pathogenesis Heba Ali
Nov 04, 14:45 The lac repressor considers inducibility when balancing search speed to binding stability Jinwen Yuan
Nov 04, 14:45 Classification of Yersinia pestis biovars through pangenome analysis Kiran Paranjape
Nov 04, 14:45 Mito-gatk: A Snakemake Pipeline for Comprehensive Mitochondrial Short-Variant Discovery in Mouse and Human Models According to GATK Best Practices Kristina Benevides
Nov 04, 14:45 Codon Usage Bias and Selection Patterns in Atlantic Herring Leyi Su
Nov 04, 14:45 The use of 16S amplicon data to investigate spatial relations between mosquito breeding sites and microbiota Lorenzo Assentato
Nov 04, 14:45 Career Framework for Data analysts Marcela Dávila
Nov 04, 14:45 Comparative study of recent contact zone of tree species in Scandinavia Maria del Pilar Herrera Egoavil
Nov 04, 14:45 The Swedish National Genomics Infrastructure (NGI) Matilda Åslin
Nov 04, 14:45 Deep Learning with Big Data for Genetic Epidemiology Max Kovalenko
Nov 04, 14:45 A multiomics approach to describe microbial diversity and activity in the Kiruna mine Petter Birger Madsen
Nov 04, 14:45 Mapping the functional genomic landscape de novo with divergent transcription analysis of PRO-seq data Serhat Aktay
Nov 04, 14:45 Spatially resolved multiomics on the neuronal effects induced by spaceflight in mice. Yuvarani Masarapu
Nov 04, 14:45 A novel data analysis pipeline based on multi-view learning for the identification of disease biomarkers Domenica D’Elia
Nov 04, 14:45 Mosaic loss of chromosome Y in blood is associated with male susceptibility for Idiopathic Pulmonary Fibrosis Josefin Bjurling
Nov 04, 14:45 Comparing functional and taxonomic metagenomics using different statistical techniques Dries Boers
Nov 04, 14:45 SLUBI - SLU’s bioinformatics infrastructure Amrei Binzer-Panchal
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